Comments (1)
I was having (probably the same) issue with scikit-bio
in scirpy. I tracked it down to this issue scikit-bio/scikit-bio#1812.
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Related Issues (20)
- mouse TRA contigs not passing pre-processing HOT 1
- IGDATA vs. IGBLAST_DB Confusion + Other Installation kerfuffles HOT 1
- Incompatibility with latest matplotlib HOT 2
- No such file or directory: 'MakeDb_gentle.py' HOT 3
- Singularity Error: raise ValueError(f"cannot insert {column}, already exists") HOT 2
- Igblastn error for Human and not Mouse HOT 1
- TypeError: clone_overlap() got an unexpected keyword argument 'colorby' HOT 1
- Singularity Container Preprocessing Error from container HOT 1
- error dandelion/utilities/_core.py KeyError: 'trbc*'. HOT 3
- ddl.to_scirpy throws an error: "Value passed for key 'airr' is of incorrect shape" HOT 7
- Error when running ddl.pp.quantify_mutations() HOT 3
- ImportError with latest AnnData HOT 1
- "clone_id" not found
- Remove python 3.9
- allow network downsample to work on any locus
- Remove `nxviz` from external
- deprecate reliance on `pandas.to_hdf` to save files HOT 1
- Gene expression scRNA-seq HOT 1
- process Parse Biosciences Evercode TCR/BCR files
- reannotate_genes encountered Unknown argument: "c_region_db" Error and so on HOT 2
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