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ZekunYin's Projects

bindash icon bindash

Fast and precise comparison of genomes and metagenomes (in the order of terabytes) on a typical personal laptop

gloo icon gloo

Collective communications library with various primitives for multi-machine training.

horovod icon horovod

Distributed training framework for TensorFlow, Keras, PyTorch, and Apache MXNet.

libpll icon libpll

Phylogenetic Likelihood Library

mash icon mash

Fast genome and metagenome distance estimation using MinHash

minimap2 icon minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

numa-stream icon numa-stream

The classic STREAM benchmark, extended to measure NUMA effects.

rabbitmash icon rabbitmash

RabbitMash: an efficient highly optimized implementation of Mash.

rabbitqc icon rabbitqc

The new version is available at https://github.com/RabbitBio/RabbitQCPlus

rabbitsketch icon rabbitsketch

fast sketch for DNA or normal sequence data (MinHash WeightedMinHash OrderMinHash and hyperloglog)

urmap icon urmap

URMAP ultra-fast read mapper

zekunyin.github.io icon zekunyin.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

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