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yumorishita avatar yumorishita commented on May 23, 2024

You mean EW and NS components of the LOS unit vector (input of LiCSBAS_decomposeLOS.py)? Their float files are in the GEOCml* directory (see File Structure), and GeoTIFF can be created by LiCSBAS_flt2geotiff.py.

Or you mean how to display the output [EW|UD].geo.tif from LiCSBAS_decomposeLOS.py? They are GeoTIFF files and can be displayed by GSI software (e.g. QGIS). If you cannot find [EW|UD].geo.tif files, it would mean the LiCSBAS_decomposeLOS.py has failed. Please check the log.

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khakim avatar khakim commented on May 23, 2024

I tried to use the following command lines:

  1. python3 /usr/local/LiCSBAS/bin/LiCSBAS_flt2geotiff.py -i E.geo -p EQA.dem_par [-o E_geo.tif] [--zero2nan] [--nan2zero] [--a_nodata num]

  2. python3 /usr/local/LiCSBAS/bin/LiCSBAS_flt2geotiff.py -i E.geo -p EQA.dem_par [-o E_geo.tif]

the outputs were generated in tif files, but the files can't be opened.

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yumorishita avatar yumorishita commented on May 23, 2024

You shouldn't type "[" and "]". Can you show me the log? What is the file size of E_geo.tif? How (what software or command) did you try to open the file?

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khakim avatar khakim commented on May 23, 2024

Sorry, my pc was infected virus and all data were broken. So I have just reinstall the pc and the LiCSBAS program is also successfully installed.

I rerun the program with my data which succeeded to get the time series results. Unfortunately, I get a problem when Small Baseline inversion by LS is running. The process looks like stagned, no progress in processing but there are no error messages.

The process is running like below:

LiCSBAS13_sb_inv.py ver1.2 20200225 Y. Morishita
LiCSBAS13_sb_inv.py -d GEOCml4 --mem_size 16000 --n_core 4
In geographical coordinates

Size of image (w,l) : 715, 697

of all images : 26

of images to be used : 24

of all ifgs : 87

of ifgs to be used : 58

of removed ifgs : 29

Threshold of used unw : 24

Reference area (X/Y) : 292:293/284:285
Allowed memory size : 16000.0 MB
Number of patches : 1
Inversion algorism : LS
Gamma value : 0.0001

Process 697/697th line (1/1th patch)...
Reading 58 ifg's unw data...
341651/498355 points removed due to not enough ifg data...

Identifing gaps and counting n_gap...
Counting n_ifg_noloop...

Small Baseline inversion by LS...

Solving 57432/156704th points with full unw at a time...
Next, solve 99272 points including nan point-by-point...
4 parallel processing
Running 0/ 99272th point...

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yumorishita avatar yumorishita commented on May 23, 2024

Can you try again without "--n_core 4"?

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khakim avatar khakim commented on May 23, 2024

Thanks a lot. It works.

However, I am still wondering why using n_core 4 (or 8) on Ubuntu LTS 18.04 it works but not on Ubuntu 20.04.

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yumorishita avatar yumorishita commented on May 23, 2024

It could be a bug, but I am not sure. I will check it later.

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khakim avatar khakim commented on May 23, 2024

Excuse me, I have another question.
What does vintercept (intercept of velocity mean) in the results?

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yumorishita avatar yumorishita commented on May 23, 2024

vintercept means c in the linear model vt+c.

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khakim avatar khakim commented on May 23, 2024

Ok. thank you very much.

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yumorishita avatar yumorishita commented on May 23, 2024

Have you solved the problem about LiCSBAS_decomposeLOS.py? @khakim

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khakim avatar khakim commented on May 23, 2024

I have not solve the problem yet.

this log when I create the tiff file.
python3 /usr/local/LiCSBAS/bin/LiCSBAS_flt2geotiff.py -i E.geo -p EQA.dem_par [-o E_geo.tif] [--zero2nan] [--nan2zero] [--a_nodata num]

LiCSBAS_flt2geotiff.py ver1.4 20200214 Y. Morishita
LiCSBAS_flt2geotiff.py -i E.geo -p EQA.dem_par [-o E_geo.tif] [--zero2nan] [--nan2zero] [--a_nodata num]
Use gdal module

Elapsed time: 00h 00m 00s

LiCSBAS_flt2geotiff.py Successfully finished!!

Output: E.geo.geo.tif

It looks like success but the tiff file is wrong (blank) when it is open. I used ubuntu.

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yumorishita avatar yumorishita commented on May 23, 2024

What software or command did you use to open E.geo.geo.tif? Ubuntu is the name of OS, not software. Normal image viewer? If so, you would see black image because the created GeoTIFF does not contain a image but data. It is normal. You should use GIS software (e.g. QGIS) to open the GeoTIFF as I said. Also please tell me the file size of E.geo.geo.tif.

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yumorishita avatar yumorishita commented on May 23, 2024

Have you solved the problem? @khakim

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yumorishita avatar yumorishita commented on May 23, 2024

It seems that the problem has been solved.

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khakim avatar khakim commented on May 23, 2024

Dear Yumorishita,

Sorry, for being late report the problem. But, the results seem to be wrong.
N_geo_geotif

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khakim avatar khakim commented on May 23, 2024

I plot them using QGIS.

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yumorishita avatar yumorishita commented on May 23, 2024

It is absolutely correct. It is just a LOS component of the unit vector, not deformation. You can use it in LiCSBAS_decomposeLOS.py.

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khakim avatar khakim commented on May 23, 2024

How do we use LiCSBAS_decomposedLOS.py to create deformation components?
I check the batch_LiCSBAS.sh and the is no the LiCSBAS_decomposedLOS.py in this batch file.

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yumorishita avatar yumorishita commented on May 23, 2024

Please see the usage and related references:
https://github.com/yumorishita/LiCSBAS/wiki/4_other_tools#licsbas_decomposelospy
https://doi.org/10.1029/2003GL018827

You need two LOS displacement data (i.e., ascending and descending).

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