yihui-zhu Goto Github PK

followers: 6.0 following: 1.0 repos: 8.0 gists: 0.0

Name: Yihui Zhu

Type: User

Bio: Genetics and Genomics Scientist. Research projects including epigenomics and genomic biomarkers of Autism Spectrum Disorder, and single cell researches.

Location: Fremont, CA

Blog: https://www.linkedin.com/in/yihui-zhu

Yihui Zhu's Projects

autismmaternalbloodexpression

Discovered differential expressed genes with ASD during maternal pregnancy using peripheral blood and study expression changes with different time point

autismplacentaepigenome

Identified Differential Methylation Regions associate with Autism Spectrum Disorder (ASD) as biomarker for early ASD detection.

epigenetics_genetics_asd_biomarker

Placental Epigenetics and Genetics Signatures for Early Biomarker Identification and Functional Analysis in Autism Spectrum Disorder (ASD) using WGBS, WGS, and RNA-seq

machine_learning_methylome

Machine learning analysis of whole-genome methylation data reveals novel prediction on tetrahydrofolate level in placenta tissue

methgenor

A pipeline analysis to efficiently navigate genotype from WGS data within DMR (Differential Methylated Regions) at WGBS data to interaction between Methylation and Genotype

pmdfinder

A python package to identify partially methylation domains from whole-genome bisulfite sequencing data

wilsondiseasemachinelearning

Utilized machine learning models to classify two types of Wilson disease from training cohort blood methylation levels and predicted in the independent testing cohort.