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yangchuhua's Projects

ads1-notebooks icon ads1-notebooks

Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing

bds-files icon bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

dap icon dap

software package for integrative genetic association analysis

genetics-backend icon genetics-backend

QC, spin VMs, load data into DBs, create LUTs and other fun backend stuff we need to do to spin https://genetics.opentargets.org

gtex-v8 icon gtex-v8

Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper

ilus icon ilus

A handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.

machine_learning_bookshelf icon machine_learning_bookshelf

机器学习深度学习相关书籍、课件、代码的仓库。 Machine learning is the warehouse of books, courseware and codes.

peer icon peer

A factor analysis package

pops icon pops

Polygenic prioritization of candidate causal genes (PoPS)

qcnorm icon qcnorm

This pipeline will run QC measures of both genotype and phenotype data and will normalise quantified phenotypes

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