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aiogremlin

arrayvisualizer

w0rthy's Array Visualizer, Revamped - 76 Sorting Algorithms with 10 Different Visuals

biopython

Official git repository for Biopython (converted from CVS)

cfncluster-node

cfncluster-node is the python package installed on the Amazon EC2 instances launched as part of CfnCluster

circlify

Circle packing similar to squarify for treemap

cpython

The Python programming language

cython

The most widely used Python to C compiler

cython-setuptools

Cython setuptools integration

drmaa-python

Python wrapper around the C DRMAA library.

drmaa2-python

Univa Grid Engine DRMAA v2 Python API

electronic-geartrain

goblin

A Python 3.5 rewrite of the TinkerPop 3 OGM Goblin

gridengine

Univa Grid Engine Open Core

jormungard

Automatically exported from code.google.com/p/jormungard

microbetrace

The Visualization Multitool for Molecular Epidemiology and Bioinformatics

pare

Rust project for compression of sequence files

pi-gen

Tool used to create the raspberrypi.org Raspbian images

pickleshare

File system based database that uses python pickles

pymc3

Probabilistic Programming in Python. Uses Theano as a backend, supports NUTS and ADVI.

pynada

attempt to create python version of R package NADA

pyxdameraulevenshtein

pyxDamerauLevenshtein implements the Damerau-Levenshtein (DL) edit distance algorithm for Python in Cython for high performance.

quasim

HCV Outbreak and quasispecies simulator.

qutiepy

salt

Infrastructure automation and management system

sleipnir

An autonomous rover toy project

snp_analysis

Low and high resolution SNP analysis

sophie

SOcial and PHilogenetic Investigation of Epidemics

svm-tnbc-racial-disparity

Code and notebooks associated with the paper "SVM-based analysis of racial disparity in triple-negative breast cancer"

thermalsim

A little personal project to simulate some thermal gadgets involving thermo-electric coolers.

treesub

A small program (which glues together other programs) that allows a user to input a codon alignment in FASTA format and produce an annotated phylogenetic tree showing which substitutions occurred on a given branch. Originally written for colleagues at the MRC NIMR.