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100-days-of-ml-code

100-Days-Of-ML-Code中文版

alignqc

Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and rarefraction curve analysis. The most basic analysis only requires a BAM file, and outputs a web browser compatible xhtml to visualize/share/store/extract analysis results.

aulab_webpage

awesome-genome-visualization

A list of interesting genome browser or genome-browser-like implementations

awesome-single-cell

List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

biocode

Bioinformatics code libraries and scripts

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

bioinformatics-1

Tools for bioinformatics

bioinformatics-training

Bioinformatics training resources

bioperl-live

Core BioPerl 1.x code

blogdown

Create Blogs and Websites with R Markdown

caffe

Caffe on both Linux and Windows

chip-seq-analysis

ChIP-seq analysis notes from Ming Tang

chip-seq-pipeline2

ENCODE ChIP-seq pipeline

course_rna-seq2015

course_rna-seq2019

cs-video-courses

List of Computer Science courses with video lectures.

deeplearning

深度学习入门教程, 优秀文章, Deep Learning Tutorial

deeploc

This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content microscopy data with deep learning"

deeptools

Tools to process and analyze deep sequencing data.

flepseq

The analysis pipeline for FLEP-seq

free-programming-books-zh_cn

:books: 免费的计算机编程类中文书籍，欢迎投稿

gseapy

Gene Set Enrichment Analysis in Python

isoseq

IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads

lab

machinelearning

Machine Learning in Action（机器学习实战）

myweb

My first web

nanonome

nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis

reditools

REDItools are python scripts to investigate RNA editing at genomic scale.

rna-seq-analysis

RNAseq analysis notes from Ming Tang