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agin

Process SMRT sequencing kinetic summary to predict regional methylation on large genome

allelic_epigenome

brain-epigenomics

brain_methylome_nhp

brainepigenomenn

Scripts used for analysis of data in paper, 'Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric disease heritability'.

cainiao_learning

Learning code

celltypeinferencemethods

A public list of computational methods for cell type inference from genome-scale DNA methylation data

chip-seq

chipseeker

:dart:ChIP peak Annotation, Comparison and Visualization

cloudasm

clusterprofiler

:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters

cnv_lncrna

cnv lncRNA project

crc_code

Bioinformatics analysis code.

fishscale

Spatial analysis of FISH data

gtex-pipeline

GTEx Consortium data production and analysis pipelines

gwas-catalog

Extracting disease-gene associations from the GWAS Catalog

handle-mysql-database-in-python

handle mysql in python

hello-world

Test in github

illumina450k-methylation

From IDAT to beta.

lab-pipelines

这里是所有分析汇总流程

lnmp

Auto compile and install LNMP/LNMPA/LAMP on CentOS/RHEL/Fedora/Aliyun/Amazon,Debian/Ubuntu/Raspbian/Deepin/Mint Linux. Easy install,upgrade and use.

machine-learning

magma_celltyping

Identify cell types underlying the associations found in GWAS summary statistics

marge

API for HOMER in R for Genomic Analysis using Tidy Conventions

markdown

mechinelearning_100days

methyexpress

GCPs methylation and expression correlation

methylation-analysis

methylpy

WGBS/NOMe-seq Data Processing & Differential Methylation Analysis

mypackage

The usually used codes