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David Wilkins's Projects

blast-tools icon blast-tools

A set of miscellaneous tools for use with the bioinformatic algorithm BLAST

deidentifyr icon deidentifyr

๐Ÿ‘ฅ An R package for deidentifying datasets that may contain personally identifiable information (PII)

dopcoa icon dopcoa

A convenience function for drawing PCoAs

forcats icon forcats

๐Ÿˆ๐Ÿˆ๐Ÿˆ๐Ÿˆ: tools for working with categorical variables (factors)

genemapr icon genemapr

Abandoned project โ€“ย use wilkox/gggenes instead

ggfittext icon ggfittext

๐Ÿ”  ggplot2 geoms to fit text into boxes

gggenes icon gggenes

โžก๏ธ๏ธโžก๏ธ๏ธโฌ…๏ธ๏ธโžก๏ธ๏ธ Draw gene arrow maps in ggplot2

gglmannotate icon gglmannotate

๐Ÿ“ˆAnnotate a ggplot with a description of a linear model

ggprotein icon ggprotein

What the Package Does (One Line, Title Case)

ggwrap icon ggwrap

๐ŸŒฏ Wrap ggplot2 plots over multiple rows

gptscreenr icon gptscreenr

๐Ÿ“šGPT-assisted source screening for scoping reviews

inspectdf icon inspectdf

Tools for Exploring and Comparing Data Frames

minspec icon minspec

Determine the minimal set of species needed to explain a set of BLAST hits from metagenomic reads. Intended to eliminate spurious species assignments and improve relative abundance estimates.

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