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brats

PyTorch & Keras implementation for BraTs (Brain Tumor Segmentation)

brats17

Brain tumor segmentation for MICCAI 2017 BraTS challenge

brats2018-tumor-segmentation

We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D UNet by adding additional brain parcellation with original MR images.

brats_segmentation-pytorch

3d unet + vae, repoduce brats2018 winner solution

ca-net

Code for Comprehensive Attention Convolutional Neural Networks for Explainable Medical Image Segmentation.

causality-medical-image-domain-generalization

[IEEE-TMI'22] Causality-inspired Single-source Domain Generalization for Medical Image Segmentation (code&data-processing pipeline)

cbrnet

A Coarse-to-fine Boundary Refinement Network for Building Extraction from Remote Sensing Imagery

db

A PyTorch implementation of "Real-time Scene Text Detection with Differentiable Binarization".

deeplung

WACV18 paper "DeepLung: Deep 3D Dual Path Nets for Automated Pulmonary Nodule Detection and Classification"

deeplung-1

WACV18 paper "DeepLung: Deep 3D Dual Path Nets for Automated Pulmonary Nodule Detection and Classification"

diceloss-pytorch

DiceLoss for PyTorch, both binary and multi-class.

eanet

[PR2022] The Code of “EANet: Iterative Edge Attention Network for Medical Image Segmentation”

genetic-u-net

The manuscript titled "Genetic U-Net: Automatically Designed Deep Networks for Retinal Vessel Segmentation Using a Genetic Algorithm" has been accepted in IEEE Transactions on Medical Imaging.

hed

code for Holistically-Nested Edge Detection

hed-1

A PyTorch reimplementation of Holistically-Nested Edge Detection

leetcode-master

《代码随想录》LeetCode 刷题攻略：200道经典题目刷题顺序，共60w字的详细图解，视频难点剖析，50余张思维导图，支持C++，Java，Python，Go，JavaScript等多语言版本，从此算法学习不再迷茫！🔥🔥 来看看，你会发现相见恨晚！🚀

lidc-idri-processing

Scripts for the preprocessing of LIDC-IDRI data

lidc_nodule_detection

lidc nodule detection with CNN and LSTM network

medsegdiff

Medical Image Segmentation with Diffusion Model

miccai-lits2017

liver segmentation using deep learning

mmsegmentation_tutorials

Jupyter notebook tutorials for MMSegmentation

nll_anomaly_detection

A simple anomaly detection algorithm for medical imaging based on multi-atlas image registration and negative log likelihood.

nnunet

optimizer-visualization

Visualize Tensorflow's optimizers.

paddleseg

PaddleSeg is a high performance semantic segmentation toolkit based on PaddlePaddle. (『飞桨』图像分割库）

pipo-fan

PIPO-FAN for multi organ segmentation over partial labeled datasets using pytorch

pytorch-cyclegan

A clean and readable Pytorch implementation of CycleGAN

pytorch-cyclegan-and-pix2pix

Image-to-Image Translation in PyTorch

pytorch-hed

a reimplementation of Holistically-Nested Edge Detection in PyTorch

pytorch-medical-segmentation

This repository is an unoffical PyTorch implementation of Medical segmentation in 2D and 3D.