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ascpsra

将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。

bio_docker_collcetion

Collect docker files for bioinformatics

bio_scripts

Practical, reusable scripts for bioinformatics

bioos

Bio-OS任务挑战赛 2023

biotools

A list of useful bioinformatics resources

d2l-zh

《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被55个国家的300所大学用于教学。

docker-lovd

flash

A modified release of JHU FLASH

get-ena-seq

gpu-jupyter

Leverage the flexibility of Jupyterlab through the power of your NVIDIA GPU to run your code from Tensorflow and Pytorch in collaborative notebooks on the GPU.

immunarch

🧬 Immunarch by ImmunoMind: R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

leoatchina-datasci

基于rstudio、code-server、jupyter-lab的dockerfile，用于快速搭建数据分析环境。

mirna

microRNA profiling pipeline

mosaicforecast

A mosaic detecting software based on phasing and random forest

multi-omic-urothelial-anti-pdl1

Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis

musicatk

Mutational Signature Comprehensive Analysis Toolkit

neopredpipe

Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.

open-bilibili

pathdb

pbsuite

This is a copy of the PBSuite developed by Adam English

pubtcrs

This repository contains C++ source code for TCR clustering and correlation analysis

scrnaseqpipeline

sigminer

🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

smallrnaseq

small rna-seq analysis package

somvarius

Somatic variant identification from unpaired samples

star-fusion

STAR-Fusion codebase

toil-rnaseq

UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq pipeline