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vmikk avatar vmikk commented on June 24, 2024 1

Could you please send me the entire folder (wd/be/eeb65c...)? There should be input data, log files, and the command itself.
Please note that there are hidden files and symlinks inside.

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thomasstjerne avatar thomasstjerne commented on June 24, 2024

Memory issue?

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vmikk avatar vmikk commented on June 24, 2024

Hello Thomas! In the results, there should be a folder pipeline_info, which contains the execution trace and report. Could you please check how much memory this process used? It shouldn't be large, although it can consume >16GB RAM (depends on the number of grid cells in the dataset).

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thomasstjerne avatar thomasstjerne commented on June 24, 2024

There seem to be no info about it:
656 be/eeb65c 7080 plot_leaflet FAILED 1 2022-10-10 17:15:45.040 2m 52s 2m 52s - - - - -
Maybe I should send you the input data that caused the error?

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thomasstjerne avatar thomasstjerne commented on June 24, 2024

When I lowered h3resolution to 2 , the pipeline succeeded. I was running it with Joes Acacia tree on a GBIF download of all australian Fabaceae data.

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vmikk avatar vmikk commented on June 24, 2024

I think we can close this issue for now.
The error was related to the huge number of small grid cells (H3 resolution 8 or 9, with hexagon edge length = 460 m and 174 m) and pandoc failed to render a map.

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