viralemergence Goto Github PK

.github

Github header

aireport

Some data visualization for a white paper on AI and viral emergence

albery-betacov

arbo-comp

Vector competence of arboviruses

batgap

Gap analysis of bat coronaviruses

bathaus

how does urban roosting shape viral diversity and zoonotic risk in bats?

battree

Visualizing the bat tree of life and a bunch of Verena stuff on top of it

becker-betacov

phylofactor for bat betacoronaviruses

betamap

The coevolutionary mosaic of bat betacoronavirus emergence risk

bolide

A review of mosquito-arbovirus vector competence experiments

carlson-betacov

BART approaches

clover

Four-in-one value pack of host-virus association data

comet-standard

A template that meets the minimum data standard for vector competence experiments 🦟✍️🔢

dallas-betacov

Plug and play approach

dangerzone

Viral diversity and zoonotic risk in endangered species

datacov

An open database of bat coronavirus surveillance (1996 to 2018)

docker-images

A place to keep all the images to use for data deployment

drosophily

A back of the envelope estimate of insect viral diversity

epizootic

An R package for spatially explicit population models of disease transmission in wildlife

farrell-betacov

fingerprint-preprint

Code for Gibb et al. (2024)

fischhoff-validation

Code for Fagre et al. 2022 Ecology Letters

fresnel

Predicting bat hosts of betacoronaviruses

fresnel_jun

Fresnel in June now!

guth-betacov

Boosted regression trees approach

hantaro

Predicting rodent reservoirs of orthohantaviruses

haystack

Zoonotic risk prediction with the embedded LF-SVD model

iceberg

❄️🐻 Climate change and cross-species viral transmission

insectdisease

An R package for working with the Ecological Database of the World's Insect Pathogens (EDWIP)

minas-gerais-yfv

Examining the drivers of YFV infection in Brazilian primates