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ampal

A simple, intuitive and Pythonic framework for representing biomolecular structure.

aposteriori-accuracy-precision

University of Edinburgh Dissertation 2020 - PyMOL sessions for the accuracy/precision plots made with A posteriori

bacxeption

Deep Learning Template for bacterial image classification in Keras.

boardgames

Script for keeping board games up to date

chronicle-ml

chronicle-mobile

DurHack 2019

cleantheburgh

Detecting fake news with Machine Learning: HackTheBurgh 2018

colabfold

Making Protein folding accessible to all via Google Colab!

coronavirus-dark-matter

Is it possible to estimate what percentage of people are asymptomatic?

cv

dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

elements

⚛⚗ A desktop App which displays the periodic table (in dark mode :D)

git-guidelines

Git Guidelines used at Osmitau Technologies - Written by @K-Kielak

glyco-balls

Glycan balls to display concentration of glycans in glycoproteins.

glyconnect-isoform

Python code to retrieve isoforms from uniprot for Glyconnect.

glyconnect-isoupdater

Glyconnect updater for the isoforms directly in the database. In this case, localhost was used.

glyconnect-protupdater

Updater for the protein database.

glyconnect-sankey

Glyconnect Sankey Graph

glycosetta-js

Glycosetta-stone in JS

glycosetta-stone

Translating from Oxford Glycan Notation to Glycosuite 14 Digit Composition.

klebsiella-sequencing

UoE GG3 2019 - Cool stuff for genome sequencing and analysis

lb6-actions

Vivaldi Tabs in Launchbar + a bunch of other stuff

little-snitch-rules

Generate Little Snitch rules to block adware and malware websites. Host lists from Steven Black.

machine-learning-for-proteins

Listing of papers about machine learning for proteins.

material.vim

A dark color scheme for Vim/Neovim based on the Material color scheme

medisia

A search engine for medical knowledge. Text Technologies for Data Science Group Project 2021

mlpractical

Code for the course MLP - (Auditing)

nextprot-ancestor-graph

The code I wrote for the NeXtProt Ancestor Graph. See full repository here: https://github.com/calipho-sib/nextprot-elements

obsidian-amino-acids

Code to obtain markdown files containing information about each residue.

obsidian-dataview

A high-performance data index and query language over Markdown files, for https://obsidian.md/.