ucl-blic Goto Github PK
Name: UCL-BLIC
Type: Organization
Bio: Bill Lyons Informatics Centre
Location: London
Blog: https://www.ucl.ac.uk/cancer/research/research-centres/bill-lyons-informatics-centre
Name: UCL-BLIC
Type: Organization
Bio: Bill Lyons Informatics Centre
Location: London
Blog: https://www.ucl.ac.uk/cancer/research/research-centres/bill-lyons-informatics-centre
Images for the UCL-CI cBioportal instance
Chromatin immunoprecipitation (ChIP-seq) analysis using BWA and MACS2 with QC steps.
A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
Software to parse and analyse deletions (and insertions) from a CRISPR resequencing experiment
EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource
Cloud-based single-cell copy-number variation analysis tool
Compilation of resources to learn NGS data analysis
Set of build scripts to install BLIC's software on UCL Legion HPC
Module files for BLIC's software on UCL Legion HPC
General scripts which make life easier when working on the Legion cluster at UCL
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.
Set of build scripts to install BLIC's software on UCL Myriad HPC
Module files for BLIC's software on UCL Myriad HPC
Code and files for the main nf-core website >>>
NextFlow pipeline for running Ginkgo
RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
Repository to store standalone scripts that do not belong to any bigger package or repository
TCGA Expression Explorer (shiny app)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.