Related Issues (20)
- Could the barrnap be used to predict the rrna of *.fna.gz file? HOT 1
- possible option for "prokaryotic" search (archaeal + procaryotic)?
- Overlapping 5.8S and 28S annotations in Eukaryotic rDNAs HOT 4
- Adding fungal HMM HOT 4
- Cannot specify a file on cmdline?
- GFF output and Fasta-headers give different start-coordinates of rRNA-genes
- nhmmer failed to run - Error: Invalid alphabet type in target for nhmmer. Expect DNA or RNA HOT 7
- [barrnap] ERROR: nhmmer failed to run HOT 3
- issue with rrna.fa writing and bed tools HOT 2
- calling two overlapping sequences separate partial 16S sequences
- please add option to force overwrite .fai index during, or automatically delete fai file after barrnap run
- barrnap-v0.9 debian package has incomplete database HOT 2
- Fail if Bedtools issues a fasta normalization error
- barrnap doesn't create any output
- barrnap
- Building eukaryotic rrna operon database
- Barrnap (nhmmer) takes an eternity to run HOT 1
- SILVA version? HOT 1
- Error: Invalid alphabet type in target for nhmmer.
- Bug getfasta with --outseq HOT 1
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from barrnap.