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Simple biomolecular sequence processing for Javascript
License: BSD 2-Clause "Simplified" License
This project forked from etal/bioseq.js
Simple biomolecular sequence processing for Javascript
License: BSD 2-Clause "Simplified" License
========= BioSeq.js ========= Javascript implementation of a biomolecular sequence object, standard functions/methods for sequence manipulation, and I/O for the FASTA format. Designed for server-side Javascript, namely Node.js. I'm not sure what tweaks are needed to make it useful client-side. Contents -------- Functions: letterCounts, letterFrequencies complement, reverseComplement transcribe, backTranscribe translate, translate3frames, translate6frames Sequence class: - Attributes are data (the character sequence), sequence id, sequence description, alphabet, features, and arbitrary annotations (the last three don't do anything yet) - Methods are all the above functions I/O: FASTA
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