Related Issues (20)
- fastq_stripleft when the resulting length is null?
- forward read trimming and filtering (Minardi et al. 2021) HOT 1
- control of 2 separate randseed events in sintax HOT 4
- from fasta files to an OTU table HOT 1
- --uchime_denovo takes abundance information into account HOT 1
- how to detect matches containing many ambiguous symbols? HOT 1
- more compile-time checks HOT 2
- Issue encountered when using vsearch --usearch_global to generate OTU frequency table HOT 3
- clean-up stale branches HOT 1
- --makeudb_usearch truncates fasta headers HOT 3
- maxseqlength is not supported by uchime_denovo command HOT 6
- vsearch --usearch_global not showing "full alignment" instead only the segment pair HOT 3
- vsearch --top_hits_only --maxaccepts 1 returns sometimes 2 values HOT 6
- Issue related to usearch_global match HOT 4
- missing userfields options
- Consequences of using vsearch on NovaSeq data HOT 4
- Fix warnings reported by Lintian HOT 2
- Obtaining the expected error for each read HOT 4
- Question about the query file of -usearch_global command when creating OTU tables HOT 6
- Convert Qiime2 database (2 files) into fasta database (1 file) for taxonomic assignment in vsearch HOT 2
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