Name: Jean-Yves Tinevez
Type: User
Company: Institut Pasteur
Bio: Facility engineer, microscopist, data analyst for Life-Sciences.
Twitter: jytinevez
Location: Paris, France
Blog: https://research.pasteur.fr/en/member/jean-yves-tinevez/
With minuscule exceptions, all the code I make is about scientific image analysis and data analysis.
Mastodon (The scientific software for tracking cells and lineaging in large microscopy images, not the social network.)
adventofcode2022
https://adventofcode.com/2022/
bioformats
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
circleskinner
A Fiji plugin for the automated detection and quantification of circular structure in images.
clij-parent-pom
clij2-plugin-template
cwns
From the paper
deformingmesh3d-plugin
An imagej/fiji plugin for interactive segmentation of 3D
demo-swing-bug
elephant-client
A client implementation of ELEPHANT
fmi-trackmate-addons
Addons for TrackMate in ImageJ
imglib2
A generic next-generation Java library for image processing
imglib2-algorithm
Image processing algorithms for ImgLib2
imglib2-icy
imglib2-icy ImgLib2 wrappers for Icy.
imglib2-tests
ImgLib tests that are not bound to specific ImgLib projects
imglib2-ui
Interactive image visualization using ImgLib2
imglib2wrapperdemo
Demo for the ImgLib2 Icy wrapper.
javasphinx-sphinx3
Sphinx extension for documenting Java projects - DEPRECATED
kymographtracker
Icy KymographTracker.
labkit-ui
Advanced Tool for Labeling And Segmentation
latex-auto-template
Template repo made for elaborating LaTeX documents that are automatically compiled and published with github actions.
mastodon-mesh
Playground to see if a Mesh implementation using Mastodon is useful.
matlab-tree
A MATLAB class to represent the tree data structure.
monogenic
Tentative complex Fourier filtering for D. Sage team.
msdanalyzer
A MATLAB class for Mean Square Displacement analysis.
neubias-springer-book-2020
Code and images for the Springer book: Bioimage Data Analysis Workflows, edited by Kota Miura and Nataša Sladoje
neubias_analystschool2019
NEUBIAS Bioimage Analyst School 2019
optofluidics
pmanisotropicdiffusionimglib2
Perona & Malik anisotropic diffusion for Icy using ImgLib2
projecteulerjyt
My (JYT) Python solutions to the Euler Project problems (https://projecteuler.net/)
simpletracker
A simple particle tracking algorithm for MATLAB that can deal with gaps.
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
