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abc-units

A Bioinformatics Course: R modules for learning units

assignment-1

assignment_0

Assignment 0

biggan

Modification of https://github.com/ajbrock/BigGAN-PyTorch for Proteins

bio_embeddings

Get protein embeddings from protein sequences

cbas

PETase implementation of ICML 2019 paper 'Conditioning by adaptive sampling for robust design'

colabdesign

Making Protein Design accessible to all via Google Colab!

d2l-en

An interactive deep learning book with code, math, and discussions, based on the NumPy interface.

deepul

dynugene

dynamical Uncertainty-aware GEne NEwork inference

genenet-

graphein

Protein Graph Library

grnexplorer

heterognn

CS224W Project

hgraph2graph

Hierarchical Generation of Molecular Graphs using Structural Motifs

intro-tutorial

Introduction to tools

latent-pockets

latent_ode

Code for "Latent ODEs for Irregularly-Sampled Time Series" paper

plotly

probabilisticlearning

probml

Code and assignments for https://probmlcourse.github.io/csc412/

protein-design

Python tools for protein design

protein-design-scripts

Scripts for MD, RosettaDesign, Free Energy Calculations

pytorch-vqvae

Vector Quantized VAEs - PyTorch Implementation

rnaseq-workflow

A repository for setting up a RNAseq workflow

sequence-design

structure-generation

Code for protein structure generative modelling

tcvae

Beta-tcvae for proteins, adapted from https://github.com/rtqichen/beta-tcvae

tianyu-lu.github.io

A lightweight, customizable single-page personal portfolio website template built with JavaScript and Sass

tianyu_lu