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Thong's Projects

cnvsim icon cnvsim

Copy-Number-Variations Simulation: Simulation for high-throughput sequencing (HTS) data

foolbox icon foolbox

Python toolbox to create adversarial examples that fool neural networks in PyTorch, TensorFlow, Keras, …

imagenet icon imagenet

Pytorch Imagenet Models Example + Transfer Learning (and fine-tuning)

omsi icon omsi

A software tool for conducting and grading examinations.

phylogenetics icon phylogenetics

Algorithm for the unique perfect phylogeny problem for 3-state characters

rosalind icon rosalind

solutions for problems in ROSALIND.info

somatic-sv-discovery icon somatic-sv-discovery

Discovery somatic structural variation given tumor & normal tissues in whole genome sequence data.

stsim icon stsim

Somatic Tree Simulation: Simulation for high-throughput sequencing (HTS) data for somatic mutations

thinkbayes2 icon thinkbayes2

Text and code for the second edition of Think Bayes, by Allen Downey.

thinkstats2 icon thinkstats2

Text and supporting code for Think Stats, 2nd Edition

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