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J.D.'s Projects

bonito icon bonito

Bonito - A PyTorch Basecaller for Oxford Nanopore Reads

fsdl-text-recognizer icon fsdl-text-recognizer

Repo that generates https://github.com/full-stack-deep-learning/fsdl-text-recognizer-project

lyrebird icon lyrebird

🦜 Simple and powerful voice changer for Linux, written in GTK 3.

megalodon icon megalodon

Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome.

minknow_api icon minknow_api

Protobuff and gRPC specifications for the MinKNOW API

nix icon nix

Nix, the purely functional package manager

personal-website icon personal-website

Code that'll help you kickstart a personal website that showcases your work as a software developer.

pre-commit icon pre-commit

A framework for managing and maintaining multi-language pre-commit hooks.

puddle icon puddle

A system for high-level, reliable programming of microfluidic devices

simswap icon simswap

The official project of SimSwap (ACM MM 2020)

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