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athowes avatar athowes commented on August 19, 2024

Why did you use ICAR? Why not use BYM?

Regarding "made no difference" -- is this in outputs? Otherwise, if BYM2, what was the estimated proportion parameter? If BYM, what were the standard deviations for the spatially structured and spatially unstructured parts?

from thesis.

theorashid avatar theorashid commented on August 19, 2024

I tried BYM and BYM2 in nimble. I didn't really look at the values of the variances parameters, other than checking they converged. "didn't make a difference" means "didn't improve model fit". Looking at my notes, this is through a mixture of WAIC and plotting the age-specific death rates for different models next to each other.

After that, I stopped using nimble and ported the working model to numpyro

from thesis.

theorashid avatar theorashid commented on August 19, 2024

Did my viva so now I have corrections #12

from thesis.

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