Comments (3)
teunbrand
commented on July 29, 2024
1
That is a good suggestion. Probably there are even more packages from bioconductor that this repository depends on implicitly. I'll add it to the description and it should be there the next time I push to github!
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teunbrand
commented on July 29, 2024
I found one potential downside of this, and that is that sessioninfo::sessioninfo() (and thus also devtools::sessioninfo()) lists the package's source as Bioconductor, which should be github. I'm thinking about going for the try_require() method that ggplot2 and ggforce use for specific functions, and then moving the bioconductor dependencies from imports to suggests.
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teunbrand
commented on July 29, 2024
I think I might have fixed this, so I'm closing this for now. If this should be a problem in the future, please open a new issue.
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Related Issues (20)
- rename geom_rectrug HOT 1
- setup_ideograms doesn't work for chromosomes without centromeres HOT 1
- Typo in `setup_cytobands` documentation HOT 1
- Refactoring of Hi-C plotting HOT 1
- General Hi-C geom
- Hi-C triangles as position function HOT 2
- Stat functions for Hi-C HOT 1
- Facets for Hi-C annotation HOT 1
- specifying columns with facet_nested() HOT 3
- Rotated Raster HOT 2
- Standalone facet nested dependencies HOT 1
- Ordering x-axis using facet nested HOT 2
- Genomic Coordinates as position scales HOT 4
- Should non-genomics related functions move to a seperate package? HOT 2
- Dendrogram scales for discrete data HOT 2
- Uneven Facets in facet_nested() HOT 2
- Error in FUN(X[[i]], ...) : unused argument (env = env) HOT 2
- Example not working: Error in FUN(X[[i]], ...): unused argument (env = env) HOT 3
- package ‘ggnomics’ is not available (for R version 3.6.1) neither ggh4x HOT 2
- Fixed x-axis labels per nested grid HOT 2
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