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3dmol.js

WebGL accelerated JavaScript molecular graphics library

alphafold

Open source code for AlphaFold.

awsomecadd

好的CADD教程，资源总结

bigdata-exercises

Exercises for the Big Data lecture at ETH Zurich (Fall 2021)

blogdown-jekyll

Automatically knit R Markdown documents, build them with Jekyll, and serve the website with servr locally

ccmgen

ccmgen-scripts

Contains plotting scripts, examples, and other small scripts relevant to CCMgen and the corresponding publication.

ccmpred

Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.

coelho2021_gmgcv1

colabfold

Making Protein folding accessible to all via Google Colab!

coursera-deep-learning-specialization

Notes, programming assignments and quizzes from all courses within the Coursera Deep Learning specialization offered by deeplearning.ai: (i) Neural Networks and Deep Learning; (ii) Improving Deep Neural Networks: Hyperparameter tuning, Regularization and Optimization; (iii) Structuring Machine Learning Projects; (iv) Convolutional Neural Networks; (v) Sequence Models

d2l-en

Interactive deep learning book with multi-framework code, math, and discussions. Adopted at 300 universities from 55 countries including Stanford, MIT, Harvard, and Cambridge.

daattali.github.io

Dean Attali's website - R/Shiny Consultant

deepeca

deeplearning.ai-assignments

directcouplinganalysis_pottsmodel_tensorflow

A Tensorflow implementation of Direct Coupling Analysis using Potts model

dreamchallenge

expert_readed_books

2021年最新总结，推荐工程师合适读本，计算机科学，软件技术，创业，**类，数学类，人物传记书籍

genemoduleannotation

genemoduleannotationpaper

This project is created for paper preparation of regression based gene module identification

gerr

Gene-set module annotation or gene-set enrichment within a regression based framework

gremlin

GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the family. The strength of measured co-evolution is strongly predictive of residue-residue contacts in the 3D structure of the protein.

gremlin_cpp

GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!

high_performance_python

Code for the book "High Performance Python" by Micha Gorelick and Ian Ozsvald with OReilly

hmm-aligner

This is the implementation of word aligner using Hidden Markov Model

hmmalign

An HMM word aligner for statistical machine translation

hmmer

HMMER: biological sequence analysis using profile HMMs

irap

integrated RNA-seq Analysis Pipeline

localcolabfold

ColabFold on your local PC

mapseq

highthroughput rRNA sequence classification and OTU mapping for metagenomic samples