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airr-standards

AIRR Community Data Standards

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bsub_jupyter

Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The name of the connection can be used to reestablish the connection later or to terminate it.

disir_package

dna-demethylation-gadd45

Demethylation mediated by Gadd45 proteins

gms

Calculation of Gene Module Scores

hackaton-frankfurt-2018

Data Science competition to address the question: In what year will e-cars become mainstream?

ipvariable

Estimation of Variable Occupancy Target regions based on replicated experiments

lmm

Linear mixed model to compare the source of variability of two factors

mit_deeplearning_bootcamp

Resources for Programming Tutorials

multiomics_ra

Repository for Multi Omics data Integration for Transcriptomics and Metabolomics in RA mouse models

permutation-test-with-the-t-statistic

Permutation Method to compare paired data not normally distributed

rnaseqtl

Collection of scripts to map eQTL with RNAseq Data and Genotype by Sequencing

scatac-benchmarking

Benchmarking computational single cell ATAC-seq methods

scbcr

Benchmarking computational methods for B cell receptor reconstruction from single cell RNA-seq data

simpa

splicenet

Splicing Network based on alternative splicing events

splicequant

Collection of Script to extract isoform estimation from MISO pipeline