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aae4seq

Tools to encode protein sequences using an Adversarial AutoEncoder

aiem_2018

Slides and data related to the talk at the "GDR AIEM", Lille 2018

bioconda-recipes

Conda recipes for the bioconda channel.

biopython

Official git repository for Biopython (converted from CVS)

browserquest

Continuing the development of Mozilla BrowserQuest

colab_playground

covid19

deep-learning-experiments

Notes and experiments to understand deep learning concepts

deep-proteomics

dummylstm

Dummy LSTM model

eccb_2018

Talk at ECCB 2018

feedit

jobim_2018

Talk at JOBIM, Marseille 2018

maftk

Small toolkit to handle and query Multiple Sequence Alignment in MAF format

models

Models built with TensorFlow

notes-dl

Personnal notes on DeepLearning

pdbfixer

PDBFixer fixes problems in PDB files

plmc

Inference of couplings in proteins and RNAs from sequence variation

porthoda

python wrapper using protein domain to speed up proteinortho

prody

A Python Package for Protein Dynamics Analysis

pybioutils

some scripts

pyhca

pyHCA repo @callebautlab

pytricks

Collection of less popular features and tricks for the Python programming language

tensorflow-statereader

This repository provides scripts to train an LSTM and then extract states from it in Tensorflow.

testy