sydney-informatics-hub Goto Github PK

.github

190318_mlr

190408_mlpy

Machine learning in python workshop page

2018_12_10_gisworkshop

Workshop Website geospatial data

2018_12_10_gisworkshopdaily

ables

Australian BioCommons Leadership Share (ABLeS) documentation

aerial-annotation

Open source annotations tools for aerial imagery. Part of https://github.com/Sydney-Informatics-Hub/PIPE-3956-aerial-segmentation

aerial-conversion

Open source tools enabling interchange between computer vision annotation and GIS data formats. Part of https://github.com/Sydney-Informatics-Hub/PIPE-3956-aerial-segmentation

aerial-segmentation

Open source aerial imagery segmentation model fine tuning, evaluation, and prediction tools. Part of https://github.com/Sydney-Informatics-Hub/PIPE-3956-aerial-segmentation

agcc_pyforgeo

agrefed-ml

Machine learning tools for modelling and predicting agriculture systems and their uncertainties.

agrefed-server

Public server repo instructions for AgReFed

agrefed-workshop

Workshop documentation, workflows and use-case examples for AgReFed DataHarvester and GEE in Python and R.

aigis

Tools for aerial and satellite imagery acquisition, processing, annotation, and analysis using artificial intelligence

all-the-folds-and-some

Testing various protein modelling tools

anzac_neurogenetics_gadi_guide

are-you-wearing-a-mask

Demo workflow for fine tuning an object detection model on a custom dataset and deploying a prediction web app.

atap-gendergaptracker

Code and resources to scrape articles and analyze proportion of women and men quoted in media.

autotesting-nf

Automated testing testing for SIH Nextflow workflows

bamqc-nf

Report summary statistics relating to quality of bam files with Nextflow

baubled_wordcloud

Generate a baubled word cloud!

bio-test-datasets

Subset bioinformatics datasets for workflow development and testing

bio-toolkit

Resource library and utility scripts and templates for public bioinformatics work

biocommons-canu-metrics

Collect compute usage metrics from NCI Gadi BioCommons Canu Workflow

bioinformatics

A suite of bioinformatics data processing and analysis pipelines, software, and training resources for common DNA and RNA sequence analysis methods.

bioinformatics_licenses

Links and other details for licensed softwares at SIH

bootstrapping-for-bqsr

Bootstrap a variant resource for non-model organisms that lack known variant databases. This is to enable GATK Base Quality Score Recalibration (BQSR) to be performed for improved variant calls.

bposd-contained

carbon-volcanics

With Ben Mather

cbioportal

WIMR cBioPortal as customised by Sydney Informatics Hub. Move from https://bitbucket.org/ctds/cbioportal.git on 19th March 2019.