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Dan Sweeney's Projects

cellbangle icon cellbangle

A Python module for visualizing and tracking ellipsioids through a video file at close to real-time. This process would yield similar data to FACS, ideally.

fem-fenics icon fem-fenics

Finite element methods for solving partial differential equations using FEniCS

inf5620 icon inf5620

Course material from 2013 for the course INF5620 Numerical Solution of Partial Differential Equations

instrumentino icon instrumentino

Instrumentino is an open-source modular graphical user interface framework for controlling Arduino based experimental instruments

kicad-library icon kicad-library

The schematic and 3D libraries supported by KiCad team. Note that the footprint libraries are the *.pretty repos themselves.

llsmtools icon llsmtools

Software for processing and analyzing lattice light sheet microscopy data.

magpy icon magpy

A Python module for visualizing magnetometer data using an accelerometer-based tilt-compensation algorithm. This module uses pyqtgraph's plotting functionality.

ncid icon ncid

Scripts that: 1.) Combine 3 microscope channels into a stack then an 8-bit RGB image in FIJI then 2.) Identify the cells and fil

nptdms icon nptdms

NumPy based Python module for reading TDMS files produced by LabView

simpleekg-emg_olimex icon simpleekg-emg_olimex

Cross-platform, Python (3.6.x) user interface for the OLIMEX SHIELD-EKG-EMG Arduino Leonardo

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