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Sushila Shenoy's Projects

h5matrix icon h5matrix

R package to making using rhdf5 more like bigmemory.

ichorcna icon ichorcna

Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

icreport icon icreport

An R package to perform Independent component analysis on gene expression data and the visualization of results.

kinship2 icon kinship2

This is my personal fork of the CRAN R package repository.

motifbreakr icon motifbreakr

A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.

officer icon officer

:cop: officer: office documents from R

pseudo_eqtl icon pseudo_eqtl

Some scripts for identifying "pseudo-cis" trans eQTL

seurat icon seurat

R toolkit for single cell genomics

xomeblender icon xomeblender

Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element

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