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Susann Bader's Projects

ccmpred icon ccmpred

Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.

ccmpredpy icon ccmpredpy

CCMgen and CCMpred: Sample protein multiple sequence alignments from evolutionary coupling potentials

ccmpredpy_master icon ccmpredpy_master

Python implementation of the CCMpred predictor of residue-residue contacts.

coupling-viz icon coupling-viz

Visualisation of a protein alignment, contact map and coupling matrices

cv icon cv

curriculum vitae

peng-motif icon peng-motif

PEnG-motif is an open-source software package for searching statistically overrepresented motifs (position specific weight matrices, PWMs) in a set of DNA sequences.

phd_thesis icon phd_thesis

Thesis is available at https://susannvorberg.github.io/phd_thesis/

practical_ml icon practical_ml

Course work for Coursera's "Practical Machine Learning"

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