Comments (6)
Can your share your data with me?
I wonder it may caused by the big size of your data.
from scissor.
Thank you for your kind cooperation. Could you give me your common email address?
Best
Yuxing Chen
from scissor.
My email address is [email protected]
Best,
Duanchen
from scissor.
Hi Duanchen,
I am running into the same issue where R studio crashes at the same stage. I do not have an output aside from the save file that is generated on line 125 of Scissor.R. I am working with small single cell and bulk datasets, and I even tried downsampling my Seurat object to 500 cells, but I still encounter this crash.
from scissor.
Hi Duanchen,
I am running into the same issue where R studio crashes at the same stage. I do not have an output aside from the save file that is generated on line 125 of Scissor.R. I am working with small single cell and bulk datasets, and I even tried downsampling my Seurat object to 500 cells, but I still encounter this crash.
Yes, I also downsampled my data and the size of my data is smaller than the data in tutorial.
from scissor.
Hi Yuxing and Shawn,
I made an update to debug this. Please let me know if it works on your data.
Best,
Duanchen
from scissor.
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