Name: Sujai Kumar
Type: User
Bio: Figuring things out. Lepidoptera, nematoda, tardigrada, Earth Biogenome Project, and Underground Fungi for now! https://twitter.com/sujai
Twitter: sujaik
Location: Edinburgh, UK
Blog: https://ylog.org/sujai
Sujai Kumar's Projects
Tools for working with second gen assemblies, fasta sequences, etc
A lightweight genome environment
Application for the visualisation of draft genome assemblies and general QC
The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.
Accurate inference of orthologous gene groups made easy. "OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthologous gene group inference accuracy"
Software Carpentry introduction to the shell for novices.
Scripts for working with tabular NCBI blast output
Scripts and relevant processed data files for Boothby et al 2015 and Koutsovoulos et al 2015 tardigrade genome papers
Calendar for Tree of Life