sufyazi Goto Github PK
Name: Suffi Azizan
Type: User
Company: Nanyang Technological University
Bio: Epigeneticist | Amateur Programmer | Armchair Linguist
Twitter: sufyazi
Location: Singapore
Name: Suffi Azizan
Type: User
Company: Nanyang Technological University
Bio: Epigeneticist | Amateur Programmer | Armchair Linguist
Twitter: sufyazi
Location: Singapore
Personal playground repo of my progress while following HarvardX CS50 course.
Repo backup
Custom scripts for pre-processing and post-processing data files for ENCODE ATAC-seq pipeline. This repo is tied to an undisclosed research project so many scripts are not usable outside of the project-specific and architectural context they are written for.
Notebooks documenting the analyses done to integrate TF footprinting data from TOBIAS and variant data called from the ATAC-seq and DNAse-seq peaks.
Publication-quality sequence logos in R
Notebooks documenting the use of the pipeline Churros by Wang & Nakato (https://doi.org/10.1093/dnares/dsad026) on P. falciparum ChIP-seq dataset.
Repository detailing Rscript used to run a normalization strategy on a computing cluster via containerization.
Personal website repo.
Repository detailing a Nextflow pipeline to run mpileup variant callling on TF footprints.
Mirrored repository to record my work on using TOBIAS to process and analyze data from an unpublished research project at work.
CV/Cover Letter Typst template by Brilliant-CV
Rust Programming Fundamentals - one course to rule them all, one course to find them...
Repository to mirror work repo where I store scripts and notebooks pertaining to variant calling pipeline (Samtools mpileup) output data integration with footprinting data.
Result files generated by nf-core viralrecon pipeline on Nextflow for MOOC FutureLearn
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Bring data to life with SVG, Canvas and HTML. 📊📈🎉
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Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
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Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
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Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.