Cannot make lfit ,about stuartlittlefair/lfit

StuartLittlefair commented on July 20, 2024

You will need to make sure that you have correctly installed all of the dependencies, particularly Tom Marsh's C++ "subs" and "roche" libraries. http://deneb.astro.warwick.ac.uk/phsaap/software/ If they are installed properly, you will need to tell the compiler where to find them. You do this by setting the LDFLAGS and CPPFLAGS environment variables https://forum.golangbridge.org/t/cflags-ldflags-documentation-somewhere/4520/2

…

On Mon, 21 Sep 2020 at 06:50, lectureman ***@***.***> wrote: Dear Littlefair, I have tried to install lfit on my laptop but I cannot install it because I have seen the error. I attached the error that I have found, after I found this error, I have created the trm folder and try to find the subs.h but I still got the error. How can I solve this problem? Please give me for suggesttion? Thank you very much. Best regards, Kittipong [image: Screen Shot 2563-09-21 at 12 45 32] <https://user-images.githubusercontent.com/48087404/93735970-f34bf200-fc08-11ea-837e-b223dbd35559.png> — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#2>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABC35N6IFB6GWLUN7K5JZLLSG3SR7ANCNFSM4RUDYMVA> .

-- Stuart Littlefair

------------------------------------------------------- *I don't expect you to respond to my email outside your working hours. * *At the University of Sheffield we value and encourage flexible working patterns, so please be assured that I respect your working pattern and I am looking forward to your response when you are next working. *

------------------------------------------------------- Dept. of Physics & Astronomy, Univ. of Sheffield, Sheffield, S3 7RH. email: [email protected] phone: +44 114 2224525

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kittipongwangnok commented on July 20, 2024

I have found the error from trm-subs installation.
Is it should be occurred on gcc version?
Because If I cannot install this and then I cannot install more libraries.

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StuartLittlefair commented on July 20, 2024

how did you try to install trm_subs?

…

On Mon, 21 Sep 2020 at 12:01, lectureman ***@***.***> wrote: I have found the error from trm-subs installation. Is it should be occurred on gcc version? Because If I cannot install this and then I cannot install more libraries. [image: Screen Shot 2563-09-21 at 17 48 28] <https://user-images.githubusercontent.com/48087404/93759426-5b63fd80-fc34-11ea-9ff0-0a54beb4e038.png> — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#2 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABC35N6NR57XBUWEJZ34JK3SG4XANANCNFSM4RUDYMVA> .

-- Stuart Littlefair

------------------------------------------------------- *I don't expect you to respond to my email outside your working hours. * *At the University of Sheffield we value and encourage flexible working patterns, so please be assured that I respect your working pattern and I am looking forward to your response when you are next working. *

------------------------------------------------------- Dept. of Physics & Astronomy, Univ. of Sheffield, Sheffield, S3 7RH. email: [email protected] phone: +44 114 2224525

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kittipongwangnok commented on July 20, 2024

Yes, but I still got the error that I attached the png file to you in the previous message.

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StuartLittlefair commented on July 20, 2024

I think you misunderstood my question. Please tell me how you tried to install trm_subs

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On Mon, 21 Sep 2020 at 12:12, lectureman ***@***.***> wrote: Yes, but I still got the error that I attached the png file to you in the previous message. — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#2 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABC35N6ACMJLAMITJ7F3IQTSG4YKTANCNFSM4RUDYMVA> .

-- Stuart Littlefair

------------------------------------------------------- *I don't expect you to respond to my email outside your working hours. * *At the University of Sheffield we value and encourage flexible working patterns, so please be assured that I respect your working pattern and I am looking forward to your response when you are next working. *

------------------------------------------------------- Dept. of Physics & Astronomy, Univ. of Sheffield, Sheffield, S3 7RH. email: [email protected] phone: +44 114 2224525

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kittipongwangnok commented on July 20, 2024

Is it not trm-subs?
I think the trm_subs means trm-subs because I could not find trm_subs.

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StuartLittlefair commented on July 20, 2024

yes - please explain how you tried to install this?

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On Mon, 21 Sep 2020 at 12:21, lectureman ***@***.***> wrote: Is it not trm-subs? I think the trm_subs means trm-subs because I could not find trm_subs. — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#2 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABC35N4GW6J62HNRWWUM5HDSG4ZLBANCNFSM4RUDYMVA> .

-- Stuart Littlefair

------------------------------------------------------- *I don't expect you to respond to my email outside your working hours. * *At the University of Sheffield we value and encourage flexible working patterns, so please be assured that I respect your working pattern and I am looking forward to your response when you are next working. *

------------------------------------------------------- Dept. of Physics & Astronomy, Univ. of Sheffield, Sheffield, S3 7RH. email: [email protected] phone: +44 114 2224525

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kittipongwangnok commented on July 20, 2024

After i downloaded this folder, I was going to inside and I have used this command line:
pip install . --user

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StuartLittlefair commented on July 20, 2024

this is not the correct method. Please follow the instructions here http://deneb.astro.warwick.ac.uk/phsaap/software/

…

On Mon, 21 Sep 2020 at 12:29, lectureman ***@***.***> wrote: After i downloaded this folder, I was going to inside and I have used this command line: pip install . --user — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#2 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABC35NYYECRHJNK5PIXPTMDSG42KVANCNFSM4RUDYMVA> .

-- Stuart Littlefair

------------------------------------------------------- *I don't expect you to respond to my email outside your working hours. * *At the University of Sheffield we value and encourage flexible working patterns, so please be assured that I respect your working pattern and I am looking forward to your response when you are next working. *

------------------------------------------------------- Dept. of Physics & Astronomy, Univ. of Sheffield, Sheffield, S3 7RH. email: [email protected] phone: +44 114 2224525

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kittipongwangnok commented on July 20, 2024

Thank you very much for your suggestion.
I will try this and I will tell you what I have done?

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kittipongwangnok commented on July 20, 2024

Dear Prof. Littlefair,
I have followed the instruction that you have suggested me to do the installation.
After I used this command:
git clone https://github.com/trmrsh/new-package.git
Then, I have to input the username and password and the result is seem like we cannot find this website:
'https://github.com/trmrsh/new-package'
How can I solve for this kind of things.
Best regards,
Kittipong

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kittipongwangnok commented on July 20, 2024

For the previous error, I can fix it.
Now, I found the new error during the lfit installation
I use this command the do the installation

make lfit

and I got the error as I attached.
How can I solve this problem.

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kittipongwangnok commented on July 20, 2024

p.s. I am doing the installation on macOS.

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StuartLittlefair commented on July 20, 2024

This looks like a bug in my code. Try adding the line "#include <string>" to the top of src/lfit_mcmc.cc.

…

On Thu, 24 Sep 2020 at 16:08, Kittipong Wangnok ***@***.***> wrote: p.s. I am doing the installation on macOS. — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#2 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABC35N5YTKEBHB5HH6FBIIDSHNOINANCNFSM4RUDYMVA> .

-- Stuart Littlefair

------------------------------------------------------- *I don't expect you to respond to my email outside your working hours. * *At the University of Sheffield we value and encourage flexible working patterns, so please be assured that I respect your working pattern and I am looking forward to your response when you are next working. *

------------------------------------------------------- Dept. of Physics & Astronomy, Univ. of Sheffield, Sheffield, S3 7RH. email: [email protected] phone: +44 114 2224525

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kittipongwangnok commented on July 20, 2024

Another error that I found is:
/usr/local/include/trm/hitem.h:81:9: warning: 'this' pointer cannot be null in well-defined C++ code; pointer may be assumed to always convert to
true [-Wundefined-bool-conversion]
if(this)
~~ ^~~~
1 warning generated.
make: *** [lfit] Error 1

How can I fix for this error?
Thank you.

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StuartLittlefair commented on July 20, 2024

Try renaming lfit_mcmc.cc and see if it compiles - this script is not necessary

…

On Mon, 28 Sep 2020 at 08:47, Kittipong Wangnok ***@***.***> wrote: Another error that I found is: /usr/local/include/trm/hitem.h:81:9: warning: 'this' pointer cannot be null in well-defined C++ code; pointer may be assumed to always convert to true [-Wundefined-bool-conversion] if(this) ~~ ^~~~ 1 warning generated. make: *** [lfit] Error 1 How can I fix for this error? Thank you. [image: Screen Shot 2563-09-28 at 14 39 17] <https://user-images.githubusercontent.com/48087404/94404580-733e0300-0199-11eb-8ff1-07a83642a619.png> — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#2 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABC35N4BUA5KFMETAOSLABDSIA5Q5ANCNFSM4RUDYMVA> .

-- Stuart Littlefair

------------------------------------------------------- *I don't expect you to respond to my email outside your working hours. * *At the University of Sheffield we value and encourage flexible working patterns, so please be assured that I respect your working pattern and I am looking forward to your response when you are next working. *

------------------------------------------------------- Dept. of Physics & Astronomy, Univ. of Sheffield, Sheffield, S3 7RH. email: [email protected] phone: +44 114 2224525

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kittipongwangnok commented on July 20, 2024

Try renaming lfit_mcmc.cc and see if it compiles - this script is not
necessary
The meaning is change lfit_mcmc.cc to another name likes:
lfit_mcmc.cc >> lfit_mcmc_1.cc
Is my understanding correct?

ps. if my understanding correct, I have tried but I still got the error.

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StuartLittlefair commented on July 20, 2024

not quite - rename to lfit_mcmc.dont_compile and try again

…

On Mon, 28 Sep 2020 at 10:18, Kittipong Wangnok ***@***.***> wrote: Try renaming lfit_mcmc.cc and see if it compiles - this script is not necessary The meaning is change lfit_mcmc.cc to another name likes: lfit_mcmc.cc >> lfit_mcmc_1.cc Is my understanding correct? ps. if my understanding correct, I have tried but I still got the error. — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#2 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABC35NYFLVFMHK4NYV2R7JTSIBIEZANCNFSM4RUDYMVA> .

-- Stuart Littlefair

------------------------------------------------------- *I don't expect you to respond to my email outside your working hours. * *At the University of Sheffield we value and encourage flexible working patterns, so please be assured that I respect your working pattern and I am looking forward to your response when you are next working. *

------------------------------------------------------- Dept. of Physics & Astronomy, Univ. of Sheffield, Sheffield, S3 7RH. email: [email protected] phone: +44 114 2224525

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kittipongwangnok commented on July 20, 2024

I already changed in /src and also in Make file and I have tried to compile again.
Finally, I got the error in another file.
Should I rename all?

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StuartLittlefair commented on July 20, 2024

No - you can change the name of lfit_mcmc.cc back to it's original name. The message "warning: 'this' pointer cannot be null in well-defined C++ code; pointer may be assumed to always convert to true [-Wundefined-bool-conversion]" is not the error - this is a warning (which you can ignore). The error will be an earlier message - please see if you can find it. Stuart

…

On Mon, 28 Sep 2020 at 10:40, Kittipong Wangnok ***@***.***> wrote: I already changed in /src and also in Make file and I have tried to compile again. Finally, I got the error in another file. Should I rename all? [image: Screen Shot 2563-09-28 at 16 36 39] <https://user-images.githubusercontent.com/48087404/94416645-4bef3200-01a9-11eb-9439-e7ff58d9ae9e.png> — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#2 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABC35N5GS6TKXWBKD6B5J7DSIBK2HANCNFSM4RUDYMVA> .

-- Stuart Littlefair

------------------------------------------------------- *I don't expect you to respond to my email outside your working hours. * *At the University of Sheffield we value and encourage flexible working patterns, so please be assured that I respect your working pattern and I am looking forward to your response when you are next working. *

------------------------------------------------------- Dept. of Physics & Astronomy, Univ. of Sheffield, Sheffield, S3 7RH. email: [email protected] phone: +44 114 2224525

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kittipongwangnok commented on July 20, 2024

Ok kub.
Now, I am going to find the method to ignore this warning.
Do you have any idea or suggestion.
kittipong

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kittipongwangnok commented on July 20, 2024

Dear Prof. Dr. Stuart,
I did not see any example file to do the model using the lfit.
May I have the example file to fo the model?
Thank you very much for your kind attention.
Best regards,
Kittipong

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Cannot make lfit about lfit HOT 22 OPEN

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