Comments (2)
timoast
commented on August 28, 2024
Hi, I believe this is addressed in the mouse brain vignette: https://satijalab.org/signac/articles/mouse_brain_vignette.html#create-a-gene-activity-matrix
# convert rownames from chromsomal coordinates into gene names
gene.key <- genebodyandpromoter.coords$gene_name
names(gene.key) <- GRangesToString(grange = genebodyandpromoter.coords)
rownames(gene.activities) <- make.unique(gene.key[rownames(gene.activities)])
gene.activities <- gene.activities[rownames(gene.activities)!="",]from signac.
pangxueyu233
commented on August 28, 2024
Okay, I have seen it, thanks for immediately replying.
from signac.
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