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MingChingChiang avatar MingChingChiang commented on June 13, 2024

I found that after I follow the alternative way for spikeinterface development version installation, the OSError is disappeared. Now I can run the Klusta sorting.
So I suggest for the mac user, maybe not using pip for spikeinterface installation, but follow the alternative way install from source.

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MingChingChiang avatar MingChingChiang commented on June 13, 2024

I got the same problem again when I setting up the environment on different mac.
Not sure what's wrong with my packages...
I attached my PIP LIST...
If someone has ant idea how to solve the problem please let me know
PIP_List.txt

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mhhennig avatar mhhennig commented on June 13, 2024

Just a guess, maybe script.bat needs to have the executable flag set? @colehurwitz, you could maybe check on your mac...

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MingChingChiang avatar MingChingChiang commented on June 13, 2024

Just a guess, maybe script.bat needs to have the executable flag set? @colehurwitz, you could maybe check on your mac...

Hi, during the weekend, I have tried several parameters for this problem.
I found that after I carefully set the channel location and the channel map,
I can avoid the OSError during the ss.klusta execution.
However, since I tried to sort the data recorded from electrode bundles instead of silicon probes.
I have hard time setting dummy locations and channel maps.
For now, I just followed the tutorial steps, modified the codes, and it worked fine now...

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alejoe91 avatar alejoe91 commented on June 13, 2024

This should be fixed with latest release

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