southerncd Goto Github PK

alphafoldgetfeatures

Get Feature section in AlphaFold

auto-gpt

An experimental open-source attempt to make GPT-4 fully autonomous.

bigcrawler

Crawler program for BIG databases

bioformattools

A small set of tools for working with biological file formats

biogeoloc

A python object package for storing and managing geographic information about biological samples

bioseqtools

A small tool for analyzing biological sequences

braker2_singularity

Singularity container for running braker2

easybadirate

Using badirate to calculate gene families with significant expansion and contraction

genewise2_docker

GeneWise2 is an old tool for sequence comparison using dynamic programming, which is now difficult to install, a modified source code and Dockerfile are provided here

genomesurvey

Genomic survey using next-generation sequencing (NGS) data, this python package performs genomic analysis based on GCE, quickly draws graphs and gives statistical results.

geogenoplot

A python package for plotting correlations between variants and environmental factors

gpt4free

decentralising the Ai Industry, just some language model api's...

gwas-and-variant-callings

hpc

Scripts for managing HPC based on lustre and SGE (ROCKS7)

hugep2g

Aligning a large number of protein sequences to a genome

mgra

mirnablast

Search genome loci using the miRNA sequence

picture

图床

pubmedcrawler

pyvmo

A test python toolkit for variant site analysis

rnaseqtools

Some small tools to help with RNA seq analysis

rrnafinder

A python tool for identify rRNA gene in plant genome.

snpfilter

A handy little tool for filtering SNPs

southerncd.github.io

Xu Yuxing's personal website

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

taxontools

A toolkit for analyzing Taxonomy