sotiraslab Goto Github PK

agileformer

This the repo for the paper tiltled "AgileFormer: Spatially Agile Transformer UNet for Medical Image Segmentation"

amyloid_classifier_deployed

amyloidpetnet

brainparts_fdg

NMF Code for calculating components from Brain imaging data.

contecenterscripts

Code used to manage, process, and analyze data for multiple longitudinal neuroimaging studies within the Conte Center at UC Irvine.

dlk

dsopnmf

Accompanying code to IPMI 2023 Scalable Orthonormal Projective NMF via Diversified Stochastic Optimization: https://doi.org/10.1007/978-3-031-34048-2_38

dynamicunet

earnest_nmf_tau_staging

Public code for Earnest et al. 2024 (Alzheimer's & Dementia)

func-bag-graphtheory_mgg

glioma_molecular_3d

Code for paper: https://doi.org/10.1093/noajnl/vdad023

mlni

Hydra clustering with correction been made. Code for paper: https://www.sciencedirect.com/science/article/pii/S1053811916001506

nrg_ai_neuroonco_preproc

Code for paper: https://ascopubs.org/doi/abs/10.1200/CCI.22.00177

nrg_ai_neuroonco_segment

Code for paper: https://ascopubs.org/doi/abs/10.1200/CCI.22.00177

plotly_demo

qcresunet

This repo is used to document the paper titled "QCResUNet: Joint Subject-level and Voxel-level Prediction of Segmentation Quality"

qr_svd_opnmf

Accompanying code for Scalable NMF via linearly optimized data compression at https://doi.org/10.1117/12.2654282.

robertjirsaraie

Repository for all my Computational Data Science PhD Projects

sc-mil

This repo for the paper titled "SC-MIL: Sparsely Coded Multiple Instance Learning for Whole Slide Image Classification"

sotiraslab.github.io

Github repo for MINDS lab website

tumor_classification

Code for paper: https://pubs.rsna.org/doi/pdf/10.1148/ryai.2021200301