Name: Sofia Murga
Type: User
Bio: Biol. BSc., MD/PhD, microbiome groupie, photographer, amiss but passionate tennis player, sister, friend, and 100% dog person.
I contain multitudes
Twitter: SofiaMurgaGa
Location: University of Pennsylvania
Sofia Murga's Projects
Slides, notebook, and datasets for integrating single cell gene expression datasets
Scripts for DO metagenomic analyses
Data, scripts and outputs for the paper "Gut microbiome variation modulates the effects of dietary fiber on host metabolism"
Workflow to perform data quality checks, filtering, normalization, statistics, and visualization for histone PTM data run through EpiProfile 2.0
Materials and presentation for the 2022 ISB Microbiome course.
Materials for Microbiome Data Science course, Spring 2024
Neural networks for microbe-metabolite interaction analysis
🌈 Interactive analysis of metagenomics data
ComBEE Python Study Group @ UW-Madison
Workshops taught through Steenbock library on R programming for researchers. Based heavily on the Data Carpentry content.
Virus Identification By iteRative ANnoTation