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Sofya Lipnitskaya's Projects

bimodality-ranking icon bimodality-ranking

Identification of bimodal genes in scRNA-Seq. - Pipeline designed to rank genes by their expression patterns to showcase the 'exp-runner' Python package at work.

dmcourse-jgu icon dmcourse-jgu

Dynamic modeling of protein dynamics using Python. - Tutorial materials for Biomedicine MScs students at JGU, Mainz (Stefan Legewie, Sofya Lipnitskaya; 2017-2020).

exp-runner icon exp-runner

exp-runner: Simple and extensible Python framework for data analysis and machine learning experiments

favseq icon favseq

FAVSeq is a machine learning-based pipeline for identifying factors affecting the difference between bulk and scRNA-Seq experiments.

ibm_finance_ap19 icon ibm_finance_ap19

Deep Learning in Finance with Keras. - NVIDIA Deep Learning Institute workshop (Frankfurt, 2019)

image-tagger icon image-tagger

Image Tagger: AI-based Android App for Automated Image Annotation

regulas icon regulas

regulAS: Bioinformatics Toolset for ML-assisted Integrative Analysis of Alternative Splicing Regulome using RNA-Seq data

vision icon vision

Datasets, Transforms and Models specific to Computer Vision

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