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Justin Sing's Projects

abc-units icon abc-units

A Bioinformatics Course: R modules for learning units

alphamap icon alphamap

An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.

alphatims icon alphatims

An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistry.

alphaviz icon alphaviz

AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquired with Bruker instrument.

bagelp icon bagelp

Parallel version of bagel https://sourceforge.net/projects/bagel-for-knockout-screens/

candle icon candle

Minimalist ML framework for Rust

dia-umpire icon dia-umpire

Computational analysis for mass spectrometry-based proteomics data

dialignr icon dialignr

This is a R package for alignment of DIA mass-spec data

documentation icon documentation

This repository contains the website documentation for OpenSWATH.

drawalignr icon drawalignr

An R package for the visualization of aligned ms2 chromatograms.

easypqp icon easypqp

EasyPQP: Simple library generation for OpenSWATH

hello-world icon hello-world

The first repository tutorial using the infamous hello world

massdash icon massdash

MassDash: Streamlined DIA-MS visualization, analysis, optimization, and prototyping

matplotlib-cpp icon matplotlib-cpp

Extremely simple yet powerful header-only C++ plotting library built on the popular matplotlib

ms-numpress icon ms-numpress

Implementations of compression schemes for numeric data from mass spectrometers.

mstools icon mstools

Tools for OpenSWATH Results Data exploration

openms icon openms

The codebase of the OpenMS project

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