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A snakemake pipeline for 10X genomics cellranger
ATAC-Seq, ChIP-Seq, and whole genome bisulfite! An introduction to analyzing some of the most popular types of epigenetic data.
This repository includes all code used in the paper: Cell trajectory modeling identifies a primitive trophoblast state defined by BCAM enrichment. The paper is available at: https://doi.org/10.1101/2021.03.27.437349
Automatic RNA-Seq Pipelines with Interactive Report
Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
Atac-Seq Analysis of Setdb1-Ko mice muscle stem cells
😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
👩🔬👨🔬 Another R Markdown Better Scientific Poster
Trajectory inference and differential expression over multiple conditions in scRNA-seq
Workshops presented by the Gladstone Bioinformatics Core
Intro to snakemake for bioinformatics - WestGrid Research Computing Summer School 2019 - University of British Columbia
The practical material from the course Biotech 7005: Bioinformatics and Systems Modelling
A single-cell RNA-seq pipeline
R vignettes for processing BUS format single-cell RNA-seq files
bvar with om
Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods
Analyzing chromatin accessibility data in R
Course material for the Action Nationale de Formation (ANF): Exploration de la diversité taxonomique des écosystèmes par metabarcoding
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
http://bioinformatics-core-shared-training.github.io/cruk-bioinf-sschool
Accurate sample inference from amplicon data with single nucleotide resolution
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.