Name: Shujia Huang
Type: User
Company: Guangzhou women and children‘s medical center
Bio: A bioinformatician, human genome researcher and programmer.
Twitter: huangshujia
Location: Guangzhou,China
Blog: https://scholar.google.com/citations?user=J4frGNMAAAAJ
Shujia Huang's Projects
convert your 23andme raw file to VCF
【Force on Genotyping】A new and practical human (or diploid) genome variants caller for de novo assembly or long reads alignment
生物信息学资源汇总
My first Flask project
A curated list of awesome Machine Learning frameworks, libraries and software.
C++ API & command-line toolkit for working with BAM data
This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially for NIPT data
一个碱基日历，每天一更
这里记录每周值得分享的生命科学和生物信息学进展内容，周日发布。
**城市数据集
Command line tools for CMDB varaints browser
《C++ Primer Plus 第6版（中文版）》原书代码、习题答案和个人笔记，仅供学习和交流。
D3/Angular chromosome visual representation
《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被55个国家的300所大学用于教学。
Continually updated data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.
Programs for drawing chromosome figure by using NGS data
a Gaussian Mixture Model (GMM) implementation.
utilities for indexing and sequence extraction from FASTA files
A tiny C library for managing SOM (Self-Organizing Maps) neural networks
Full Stack Python source with Pelican, Bootstrap and Markdown.
GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only
GATK Pipeline: Recalibrates mapping qualities and calls variants using GATK
GATK Indel Realignment and Quality Recalibration: Deduplicates, realigns, and recalibrates a Mappings object in order to improve the quality of downstream variant calls, per the GATK best practices in variant detection.
基因组学挑战题说明
Genomics data visualization in Python by using matplotlib.
Data repository for geneview examples
A NGS data analysis toolkit
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent
