Failed in running the unit tests about sferes2 HOT 2 CLOSED

Sferes did not find the boost libraries (libboost*.so). You can fix it by
adding --boost-libs=the_path_to_your_boost_libaries when doing
./waf configure

On Mon, May 30, 2016 at 11:27 AM MiaoqiangSu [email protected]
wrote:

Hi jbmouret, The terminal shows the following errors when I do the ./waf
check. These commands are done under Ubuntu 14.04 LTS. Thanks in advance!
module : [modules/nn2]
module : [modules/map_elite]
Waf: Entering directory /home/sferes/build'
Entering directory/home/sferes'
Entering directory /home/sferes/modules/'
Entering directory/home/sferes/modules/'
Waf: Leaving directory `/home/sferes/build'
'build' finished successfully (0.005s)
Running the unit tests
default/tests/tests_modif_diversity .........ERROR
default/tests/tests_eval_parallel ...........ERROR
default/tests/tests_eval_mpi ................ERROR
default/tests/tests_ea_cmaes ................ERROR
default/tests/tests_ea_nsga2 ................ERROR
default/tests/tests_ea_eps_moea .............ERROR
default/tests/tests_ea_rank_simple ..........ERROR
default/tests/tests_ea_dom_sort .............ERROR
default/tests/tests_gen_cmaes ...............ERROR
default/tests/tests_gen_bit_string ..........ERROR
default/tests/tests_gen_evo_float ...........ERROR
default/tests/tests_gen_sampled .............ERROR
default/modules/nn2/test_nn .................ERROR
default/modules/nn2/test_dnn ................ERROR
default/modules/nn2/test_mlp ................ERROR
default/modules/nn2/test_hyper_nn ...........ERROR
default/modules/nn2/test_dnn_ff .............ERROR
default/modules/nn2/test_osc ................ERROR
default/modules/nn2/test_hyper_nn_anh .......ERROR
default/modules/map_elite/test_map_elite ....ERROR
debug/tests/tests_modif_diversity ...........ERROR
debug/tests/tests_eval_parallel .............ERROR
debug/tests/tests_eval_mpi ..................ERROR
debug/tests/tests_ea_cmaes ..................ERROR
debug/tests/tests_ea_nsga2 ..................ERROR
debug/tests/tests_ea_eps_moea ...............ERROR
debug/tests/tests_ea_rank_simple ............ERROR
debug/tests/tests_ea_dom_sort ...............ERROR
debug/tests/tests_gen_cmaes .................ERROR
debug/tests/tests_gen_bit_string ............ERROR
debug/tests/tests_gen_evo_float .............ERROR
debug/tests/tests_gen_sampled ...............ERROR
debug/modules/nn2/test_nn ...................ERROR
debug/modules/nn2/test_dnn ..................ERROR
debug/modules/nn2/test_mlp ..................ERROR
debug/modules/nn2/test_hyper_nn .............ERROR
debug/modules/nn2/test_dnn_ff ...............ERROR
debug/modules/nn2/test_osc ..................ERROR
debug/modules/nn2/test_hyper_nn_anh .........ERROR
debug/modules/map_elite/test_map_elite ......ERROR

Successful tests: 0 (0.0%)
Failed tests: 0 (0.0%)
Erroneous tests: 40 (100.0%)

Total number of tests: 40

Unit tests finished
'check' finished successfully (0.094s)

Before this, I did ./waf configure, and the terminal returns:

module : [modules/nn2]
module : [modules/map_elite]
Check for program g++ or c++ : /usr/bin/g++
Check for program cpp : /usr/bin/cpp
Check for program ar : /usr/bin/ar
Check for program ranlib : /usr/bin/ranlib
Checking for g++ : ok

boost headers : Version 1_54 (/usr/include)
library boost_serialization : not found
library boost_filesystem : not found
library boost_system : not found
library boost_unit_test_framework : not found
library boost_program_options : not found
library boost_graph : not found
library boost_mpi : not found
library boost_python : not found
library boost_thread : not found
Checking for header tbb/parallel_for.h : ok /usr/include
Checking for library libtbb : ok /usr/lib
Checking for header tbb/parallel_for.h : ok /usr/include
Checking for library libtbb : ok /usr/lib
Checking for header mpi.h : ok /usr/include/mpi
Checking for SDL (optional) : not found
Checking for header Eigen/Core : ok /usr/include/eigen3
Check for program ode-config : not found
Checking for ODE (optional) : not found
Checking for GSL (optional) : not found

--- configuration ---
compiler:

• CXX: gcc boost version: 1_54 mpi: False Compilation flags :
• default: CXXFLAGS : -D_REENTRANT -Wall -fPIC -ftemplate-depth-1024
  -Wno-sign-compare -Wno-deprecated -Wno-unused -DEIGEN3_ENABLED
  -DSFERES_ROOT="/home/sferes" -DNDEBUG -O3 -ffast-math LINKFLAGS:
• debug: CXXFLAGS : -D_REENTRANT -Wall -fPIC -ftemplate-depth-1024
  -Wno-sign-compare -Wno-deprecated -Wno-unused -DEIGEN3_ENABLED
  -DSFERES_ROOT="/home/sferes" -O1 -ggdb3 -DDBG_ENABLED LINKFLAGS:

--- license ---
Sferes2 is distributed under the CECILL license (GPL-compatible)
Please check the accompagnying COPYING file or http://www.cecill.info/
'configure' finished successfully (0.154s)

And ./waf build returns:

./waf buildmodule : [modules/nn2]
module : [modules/map_elite]
Waf: Entering directory /home/sferes/build'
Entering directory/home/sferes'
Entering directory /home/sferes/modules/'
Entering directory/home/sferes/modules/'
Waf: Leaving directory `/home/sferes/build'
'build' finished successfully (0.019s)

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from sferes2.

Thanks for your reply @jbmouret . However, when doing "./waf configure ----boost-libs=/usr/lib/x86_64-linux-gnu", the terminal returns:

module : [modules/nn2]
module : [modules/map_elite]
Check for program g++ or c++ : /usr/bin/g++
Check for program cpp : /usr/bin/cpp
Check for program ar : /usr/bin/ar
Check for program ranlib : /usr/bin/ranlib
Checking for g++ : ok
boost headers : Version 1_54 (/usr/include)
library boost_serialization : ok
library boost_filesystem : ok
library boost_system : ok
library boost_unit_test_framework : ok
library boost_program_options : ok
library boost_graph : ok
library boost_mpi : ok
library boost_python : ok
library boost_thread : ok
Checking for header tbb/parallel_for.h : ok /usr/include
Checking for library libtbb : ok /usr/lib
Checking for header tbb/parallel_for.h : ok /usr/include
Checking for library libtbb : ok /usr/lib
Checking for header mpi.h : ok /usr/include/mpi
Checking for SDL (optional) : not found
Checking for header Eigen/Core : ok /usr/include/eigen3
Check for program ode-config : not found
Checking for ODE (optional) : not found
Checking for GSL (optional) : not found

And the errors still exist when I tried to do the "./waf check". The same problem even when I tried "ln -s /usr/lib/x86_64-linux-gnu/libboost* ."

from sferes2.