scottdbrown Goto Github PK
Name: Scott Brown
Type: User
Bio: Research Associate - Canada's Michael Smith Genome Sciences Centre, BC Cancer Immunotherapy Program
Location: Vancouver, British Columbia
Blog: www.scottbrown.io
Scott Brown's Projects
bcgsc-scripts
General scripts catered to the BCGSC computer systems
bonito
A PyTorch Basecaller for Oxford Nanopore Reads
buzzersystem
Self-hosted buzzer system for apartment buildings with only one phone number allowed per unit
host-transcriptome-epigenome-fuso
imdb_movies
immunopog
immunoPOG scripts
ipca
isovar_colo829_test
minion-plasmid-consensus
Code for MinION Plasmid Sequence Verification pipeline
pyensembl
Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
rnaseq-tcellclonality
R script for processing MiTCR-derived CDR3 data from PTCL RNA-seq
self-immunopeptidome_cancer
Scripts relevant to Self-immunopeptidome and Cancer manuscript
seqdist
stat540-tissuespecificmethylation
Final Group Project
tcr-from-rnaseq2015
Code associated with Brown, Raeburn, and Holt, Profiling tissue-resident T cell repertoires by RNA sequencing, Genome Medicine 2015
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