Organize configuration file about taca HOT 5 CLOSED

Probably, but I think that was in Slack or something.

I think this is a good and logical idea! I would add that is great to sync up command line options with the config file. This way Click provides the opportunity to set up defaults for the commands automatically 😄

The top level would then be options available for the root command (group)

from taca.

that sounds good :) Is this what you're referring to?

from taca.

Great, default_map is exactly what I mean!

Implementation example:
https://github.com/robinandeer/chanjo/blob/master/chanjo/cli.py#L52

How the chanjo config looks like:

# chanjo config

dialect = "sqlite"
db = "/home/vagrant/demo/coverage.sqlite"

[annotate]
cutoff = 10

[report]
panel = "/home/vagrant/demo/dbCMMS.v1.1.hgnc.txt"
panel_caption = "dbCMMS v1.1"
port = 5000
host = "0.0.0.0"

from taca.

that's neat, tack Robin!

from taca.

Done

from taca.