sci-f Goto Github PK
Name: Scientific Filesystem
Type: Organization
Bio: formats and tools for reproducible science
Blog: https://sci-f.github.io
Name: Scientific Filesystem
Type: Organization
Bio: formats and tools for reproducible science
Blog: https://sci-f.github.io
Modular application recipes for the Scientific Filesystem (SCIF)
a template ready to go to easily build, test, and deploy reproducible SCIF containers!
ctfw (containers for the win) is a base python module for competitive containers
example scientific filesystem to assess metrics across different solutions to a single problem, printing "Hello World"
demo / testing for containers ftw framework, testing building and running on CI
containers-ftw version of https://www.kaggle.com/c/flavours-of-physics
A hello world example for a scientific filesystem
An example container with modules to run an executable in different environments / with different job managers
an example scientific filesystem to provide custom metrics and helpers for a container
This is a demo about how to develop and deploy a pipeline using nextflow, scif, a container (Singularity and Docker) and its posterior deployment.
The Scientific Filesystem Specification and Documentation
an example variant calling scientific workflow with the standard container integration format (SCI-F)
golang implementation of the Scientific Filesystem
Tutorial with snakemake and Scientific Filesystem
Technical Oversight Board (TOB)
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China tencent open source team.