Comments (3)
Duplicate #154
from syri.
as you mentioned above i just did the reverse complement of my query genome i got the out fie but i don't now is it correct
because i have i phylogenetic tree based on gene presence and absence that shows the reference
and query genome are not closely related but the synteny plot from plotsr with this out file shows syntenic regions
from syri.
Please start a separate issue for new questions.
from syri.
Related Issues (20)
- complicated region not detected correctly HOT 2
- About InvOut and Inv breakpoints HOT 3
- Huge chromosome problem HOT 6
- keyerror HOT 3
- Request for Guidance on Converting NOTALs to Presence in Syri Outputs HOT 3
- translocated to different chromosomes HOT 3
- Consult DUP/INVDP for details HOT 2
- microhomology at ends of insertions HOT 4
- INV vs INVDUP HOT 2
- ERROR syri:201 - Length of query sequence of Chr1 is less than the maximum coordinate of its aligned regions HOT 7
- Wrong CIGAR string HOT 1
- IndexError: list index out of range syri HOT 9
- SYRI:IndexError: list index out of range HOT 1
- how to merge SyRI vcfs HOT 2
- Questions about 'NOTAL' HOT 2
- Question about output
- Support for promer HOT 3
- CIGAR string starting with non-matching base HOT 1
- Overlapping INV and SYN HOT 3
- A very strange result of syri HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from syri.