Comments (1)
Hi thank you for using our tool! This is a tricky problem that we are still thinking about how to resolve it properly. We realized that setting a seed is not enough.
Given that network propagation is a stochastic process at each step of the iteration, the probability (information) of each cell can be different even if a stationary state of the entire cell-to-cell network is reached. Although two independent analyses with the same settings result in different true_cell_top_idx, I believe the differences should be very subtle and will not affect the following analysis.
Please let me know if have any other questions.
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